Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819643.1_cds_XP_016500127.1_13983
CDS Infomation

[gene=LOC107818603] [db_xref=GeneID:107818603] [protein=DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like] [protein_id=XP_016500127.1] [location=join(14612..16833,17967..18024)] [gbkey=CDS]
Sequence

ATGGCAAGAGGACCAGCAAGAAATCTCCTTTATCTATATTTAAACAATAATAACAGTTCA
AAGTTTAGATTTTTCTCAGTTTCCAGTAGATTCCTACATACCCATTTCACAGAACCGAAA
AAAATCCAAGATTTTCACATTTGTGGACACCCTTTACCAACCCCACCTCGATTTTCACCT
TTATGGTTTAATCAATGGAAAAGGTTTGATCTTTTTAATTTTTATGGACACCCTTTTTCC
ACAGTGGTGGAAAATGAAGATAATGAATCAGAACTTTGTAATTTGGATGTTGAAGAGAAT
GAGTGTGAAAATGGAACGTTAGGGTCTGAGAAAAGATTGAATTTTGTTCAAATAGCTAGT
CGTGATCCGGTCGAAATATATAAGGAGCTTAGGGATGCTTCCAAGGGGGAAAAGCAAGCG
CGAGCCGATTGGGATGTTTTGATTGAGATTTTTAGATGTTTTGCTAAGTCCGGATGGGCT
TCAAATCAGGCTCTAGCTGTGTATATTGGGGCTGCATTCTTTCCTACAGCAGCGCATAAG
TTTCGTAACTTTTTCTTTAAGAAGTGTAAGGTTGATATTGCGAAGTACTTAGTGTCGCTT
GGTCCGTGCATTGAGGCTGAGAAGTTTCTATTTCCGATCTTCGTGGAGTTTTGCTTAGAA
GAGTTTCCTGATGAGATAAAGAATTTCAGGAAAATGGTTGAGTCGGCAGATTTGACAAAA
CCTCATACTTGGTTTCCATTTGCCAGGGCGATGAAACGCAAGATCATATATCATTGTGGT
CCCACAAATAGTGGTAAAACATATAACGCATTGCAAAGGTTCATGGAAGCGAAGAAGGGA
ATTTATTGTAGTCCTCTAAGATTGTTGGCTATGGAGGTTTTCGATAAGGTGAATGGATTA
GGAGTATATTGTAGTCTTCTTACAGGGCAGGAGAAGAAGCATGTCCCATTTTCTAATCAC
GTTGCTTGCACGGTTGAGATGGTTTCAACTGATGAGATGTATGATGTAGCAGTTATTGAT
GAAATCCAAATGATGGCGGACTCGCATAGAGGTTATGCATGGACAAGGGCTCTACTAGGG
TTAAAGGCTGACGAGATACATGTTTGTGGAGATCCAAGTGTACTGGATATTGTTCGCAAA
ATCTGTTCTGAAACTGGGGATGAGTTGGTAGAACAACATTATGAGAGGTTTAAGCCATTG
GTGGTTGAAGCCAAGACTCTTTTAGGTGATCTGAAAAACGTGAGGTCAGGGGATTGTGTT
GTTGCTTTTTCAAGGAGAGAAATATTTGAGGTAAAATTGGCGATTGAGAAGCATACTAAT
CACCGTTGTTGTGTAATATATGGTGCCTTACCACCAGAAACTCGAAGACAGCAAGCTACC
TTATTTAACGATCCGAACAATGAGTTTGATGTCTTGGTTGCCAGCGATGCAGTCGGAATG
GGTTTAAACCTGAACATTCGAAGAATCATCTTCAACACCCTGTCAAAGTACAATGGTGAC
AAGATTGTTCCTGTTCCCTCGTCACAGGTGAAGCAGATTGCCGGAAGAGCTGGTCGGAGG
GGAAGTCGCTATCCTGAAGGACTAACCACCACTTTACAGCTGGAAGATTTGGACTATTTA
ATCGAGTGTCTGAAGAAGCCATTTGACGAAGTTCACAAAGTTGGTCTCTTTCCTTTCTAT
GAGCAGGTTGAGTTATTTGCGGGGCAAATTCCAAATTCTACATTCTCCGAGCTGCTTGAT
AGGTTTGGTGAAAATTGCCGTTTGGACGGTTCTTATTTCTTGTGCCAGTATAACCACATA
AAAAAGATAGCTAATATGCTGGAGAAAGTTCAAGGATTATCTCTTGAAGATCGTTTCAAT
TTTTGCTTTGCTCCTGTTAACATTAGAGACCCAAAAGCAATGTACCATCTTCTGAAGTTT
GCGTCATCATATGCACAAGAGCTGCCTGTTAATATAGCAATGGGCATGCCAAAATGTTCT
GCTCGTAATGATTCGGAGCTCCTGGATCTTGAGACTAGGCACCAAGTGTTGTCCATGTAT
ATGTGGTTATCTAATCACTTTGAGAACGACAAATTTCCATATTTCAAAAAGGCTGAGGCA
ATGGCAACAGAGATTGCTGAGTTACTAGGTGAATCACTAGCAAATGCTCGGTGGAAACCA
GAGTCAAGGAATTCCGGGAAACAAAAAGGCCAGGAGAAGGATGGTGGTAATGAAAGGCCA
AGGAGAAGACAGGAAACATCTTTGTCTCACCAGCAGCAGCTGGAGAAGGTTGCAGCATAA

Peptide Sequence

PEP ID

XP_016500127.1
PEP Infomation

PREDICTED: DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like [Nicotiana tabacum]
Sequence

MARGPARNLLYLYLNNNNSSKFRFFSVSSRFLHTHFTEPKKIQDFHICGHPLPTPPRFSP
LWFNQWKRFDLFNFYGHPFSTVVENEDNESELCNLDVEENECENGTLGSEKRLNFVQIAS
RDPVEIYKELRDASKGEKQARADWDVLIEIFRCFAKSGWASNQALAVYIGAAFFPTAAHK
FRNFFFKKCKVDIAKYLVSLGPCIEAEKFLFPIFVEFCLEEFPDEIKNFRKMVESADLTK
PHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNGL
GVYCSLLTGQEKKHVPFSNHVACTVEMVSTDEMYDVAVIDEIQMMADSHRGYAWTRALLG
LKADEIHVCGDPSVLDIVRKICSETGDELVEQHYERFKPLVVEAKTLLGDLKNVRSGDCV
VAFSRREIFEVKLAIEKHTNHRCCVIYGALPPETRRQQATLFNDPNNEFDVLVASDAVGM
GLNLNIRRIIFNTLSKYNGDKIVPVPSSQVKQIAGRAGRRGSRYPEGLTTTLQLEDLDYL
IECLKKPFDEVHKVGLFPFYEQVELFAGQIPNSTFSELLDRFGENCRLDGSYFLCQYNHI
KKIANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLKFASSYAQELPVNIAMGMPKCS
ARNDSELLDLETRHQVLSMYMWLSNHFENDKFPYFKKAEAMATEIAELLGESLANARWKP
ESRNSGKQKGQEKDGGNERPRRRQETSLSHQQQLEKVAA

Transcript Sequence

Gene sequence data has not been registered.